 |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Vradi09g06110.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
bHLH |
| Protein Properties |
Length: 328aa MW: 37216.7 Da PI: 5.0039 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi09g06110.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 17.6 | 6.7e-06 | 187 | 209 | 33 | 55 |
.TTS-STCHHHHHHHHHHHHHHH CS
HLH 33 apskKlsKaeiLekAveYIksLq 55
++s+ l+K++iL k+++Y+k+Lq
Vradi09g06110.1 187 EDSTVLDKISILGKTIDYVKHLQ 209
467779****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MDESWEKWFS DLEMDDDKLH LFNEHDVNSL EEELMKGESS VPYDSDFSIK NNNNMENISC 60
LETNTNSSSE KNQELSSSFE DSTVVSNDVD EAFHAEQKKR STLQTEQHKM SETRDKIRTM 120
MEMGDDEFHL FTNSLEEELM KVESTSGFDI NNKKKNNIDG GSCLKTNTQH ANSGLEKHIC 180
SCTLAFEDST VLDKISILGK TIDYVKHLQN RVKDLQEQKR KTESVKCSKN KGSNVNISEK 240
FPKVDASVSG KDVRIRVICD RRQHIVAKLF SKLESHHLSI VGSSVLPLGS SALNICIICQ 300
VEHFSMAIDD LVNILNEDLL KLCKFQY*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015042 | 1e-141 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |
